PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0198s0340.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 168aa    MW: 18595.8 Da    PI: 5.652
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0198s0340.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-17147555
                     AP2  5 GVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                            GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAa+a+++a+  + g
  SapurV1A.0198s0340.1.p  1 GVRQRR-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAARAYDQAAVLMSG 47
                            9**998.**********8.....334*********************977766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.0E-25148IPR001471AP2/ERF domain
PfamPF008471.0E-10143IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-15150IPR016177DNA-binding domain
CDDcd000188.17E-26147No hitNo description
PROSITE profilePS5103219.006161IPR001471AP2/ERF domain
SMARTSM003801.6E-23161IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
GVRQRRWGSW VSEIRHPLLK RRVWLGTFET AEEAARAYDQ AAVLMSGHDP ISGDQPPLTA  60
PPNGFSQILH AKIRKCSKVP SPSMTYFSNS NWVMTVQLGT RDKSQVSEST LPLPDHQSSG  120
GVSGTECRAE MDEEERVALQ MIEELLYRSC PSPTFEAQDQ GDGSFFP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002308080.23e-83AP2 domain-containing transcription factor family protein
SwissprotQ9XI334e-40WIN1_ARATH; Ethylene-responsive transcription factor WIN1
TrEMBLB9HAK53e-83B9HAK5_POPTR; AP2 domain-containing transcription factor family protein
STRINGPOPTR_0006s06870.19e-83(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57633144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-31ERF family protein